{"id":3808,"date":"2024-07-10T15:53:48","date_gmt":"2024-07-10T06:53:48","guid":{"rendered":"https:\/\/bdsl.jbnu.ac.kr\/blog\/?p=3808"},"modified":"2024-07-10T15:53:48","modified_gmt":"2024-07-10T06:53:48","slug":"snuh-data-curation","status":"publish","type":"post","link":"https:\/\/bdsl.jbnu.ac.kr\/blog\/snuh-data-curation\/","title":{"rendered":"SNUH data curation"},"content":{"rendered":"\n

\uc694\uc57d<\/h2>\n\n\n\n

\uc784\uc0c1 \ub370\uc774\ud130\uc758 \uccb4\uacc4\uc801 \uc218\uc9d1 \ubc0f \uad00\ub9ac\ub97c \uc704\ud574 \ub370\uc774\ud130\ub97c \uc7ac\uad6c\uc131\ud558\uc600\uc2b5\ub2c8\ub2e4. 1\uac1c\uc758 \ud45c\uc5d0 \ubaa8\ub4e0 \uc815\ubcf4\ub97c \uae30\ub85d\ud558\uace0 \uc788\ub358 \uae30\uc874 \ub370\uc774\ud130 \uc218\uc9d1 \uccb4\uacc4\ub97c 5\uac1c\uc758 excel \ud30c\uc77c, 18\uac1c\uc758 table\ub85c \ubd84\ub9ac\ud558\uc600\uace0, \uae30\uc874 \uc790\ub8cc (2024\ub144 6\uc6d4 28\uc77c \uae30\uc900) \ub0b4\uc6a9\uc744 \uc785\ub825\ud558\uc600\uc2b5\ub2c8\ub2e4. \ube44\uc2b7\ud55c \uc758\ubbf8\ub97c \uc9c0\ub2cc \ub2e8\uc704\ub97c \ub370\uc774\ud130\ub97c \ubd84\ub958\ud558\uc5ec, \uac01\uac01\uc758 \ub370\uc774\ud130\ub97c \uc27d\uac8c \uad00\ub9ac\ud558\ub294 \uac83\uc774 \ubaa9\uc801\uc785\ub2c8\ub2e4.<\/p>\n\n\n\n

\ub370\uc774\ud130 \uad00\ub9ac \uce21\uba74\uc5d0\uc11c\ub294 \ucd9c\ub825 (fetch), \uc785\ub825 (insert), \uc218\uc815 (update), \uc0ad\uc81c(delete)\ub85c \ubd84\ub9ac\ud558\uc600\uc2b5\ub2c8\ub2e4. \uac01 \uacfc\uc815\uc740 excel \ud30c\uc77c \uc791\uc131, web server \uc5c5\ub85c\ub4dc, \uc791\uc5c5 \ucc98\ub9ac\ub85c \ub098\ub204\uc5b4 \uc9c4\ud589\ud569\ub2c8\ub2e4. \uc608\ub97c \ub4e4\uc5b4 \ud2b9\uc815 table\uc758 \ub0b4\uc6a9\uc744 \uc218\uc815\ud558\uae30 \uc704\ud574\uc11c\ub294 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0\uc11c fetch \uba85\ub839\uc744 \uc774\uc6a9\ud574 \uc804\uccb4 \ud14c\uc774\ube14\uc744 excel \ud30c\uc77c\ub85c \ucd9c\ub825\ud558\uace0, \uadf8 \ud30c\uc77c\uc744 \uc218\uc815\ud55c \ud6c4 \uc11c\ubc84\uc5d0 \uc5c5\ub85c\ub4dc \ud558\uace0 update \uba85\ub839\uc744 \uc2e4\ud589\ud574 database\uc5d0 \uc218\uc815 \uc0ac\ud56d\uc744 \ubc18\uc601\ud560 \uc218 \uc788\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

Database \uc0ac\uc6a9 \ubc29\ubc95<\/h2>\n\n\n\n

\ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0\uc11c \ub370\uc774\ud130\ub97c \uac00\uc838\uc624\uace0 (fetch), \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0 \uc0c8\ub85c\uc6b4 \ub370\uc774\ud130\ub97c \uc785\ub825 (insert)\ud558\uac70\ub098, \uae30\uc874 \ub370\uc774\ud130\ub97c \uc218\uc815 (update)\ud558\uac70\ub098 \uc0ad\uc81c (delete)\ud560 \uc218 \uc788\uc2b5\ub2c8\ub2e4. \uc774\ub97c \uc704\ud574\uc11c \uac01\uac01 fetch, insert, update, delete \uae30\ub2a5\uc744 \uc81c\uacf5\ud569\ub2c8\ub2e4. \uc774 \ub54c \ub370\uc774\ud130\ub294 \ubaa8\ub450 excel \ud30c\uc77c\uc744 \uc774\uc6a9\ud574 \uad00\ub9ac\ud569\ub2c8\ub2e4. \uc989, excel\ud30c\uc77c\uc744 \uc791\uc131\ud558\uace0, \uc774\ub97c server\uc5d0 \uc5c5\ub85c\ub4dc\ud558\uace0 \uba85\ub839\uc744 \uc2e4\ud589\ud558\uc5ec database\ub97c \uc774\uc6a9\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

\uc774\ubbf8 \ub9ce\uc740 \ub370\uc774\ud130\ub97c \uc785\ub825\ud588\uae30 \ub54c\ubb38\uc5d0, \ud574\ub2f9 \ub370\uc774\ud130\ub97c \ucd5c\ub300\ud55c \uc0b4\ub824\uc11c \ub370\uc774\ud130\ubca0\uc774\uc2a4\ub97c \uad6c\uc131\ud558\uc600\uae30 \ub54c\ubb38\uc5d0 \ub370\uc774\ud130 update\ub97c \uba3c\uc800 \uc124\uba85\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

1. Update – \ub370\uc774\ud130 \uc218\uc815<\/h3>\n\n\n\n

\uc774\ubbf8 \uc785\ub825\ud55c \ub370\uc774\ud130\ub97c \uc218\uc815\ud558\uae30 \uc704\ud574\uc11c\ub294 \uc785\ub825 \ub370\uc774\ud130\ub97c \uba3c\uc800 \uac00\uc838\uc628 \ud6c4 (fetch), \uadf8 \ub0b4\uc6a9\uc744 \uc218\uc815\ud558\uace0, \ub370\uc774\ud130\ubca0\uc774\uc2a4\ub97c \uc218\uc815 (update)\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

1-1. \uc11c\ubc84 \uc811\uc18d<\/h4>\n\n\n\n

\ub370\uc774\ud130\ubca0\uc774\uc2a4\ub97c \ud65c\uc6a9\ud558\uae30 \uc704\ud574\uc11c \uc11c\ubc84\uc5d0 \uc811\uc18d\ud569\ub2c8\ub2e4. Web browser\uc5d0 \uc544\ub798 URL\uc744 \uc785\ub825\ud558\uace0 \uc0ac\uc6a9\uc790 ID\uc640 \ube44\ubc00\ubc88\ud638\ub97c \uc785\ub825\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

http:\/\/bdsl.jbnu.ac.kr:13000<\/p>\n\n\n\n

1-2. \ub370\uc774\ud130 \uac00\uc838\uc624\uae30<\/h4>\n\n\n\n

\ub370\uc774\ud130\ubca0\uc774\uc2a4\uc758 \ub0b4\uc6a9\uc744 \uac00\uc838\uc624\uae30 \uc704\ud574\uc11c\ub294 1_fetch.ipynb<\/code> notebook\uc744 \uc774\uc6a9\ud569\ub2c8\ub2e4. Notebook \ud30c\uc77c\uc744 \ud074\ub9ad\ud558\uba74, \uc544\ub798\uc640 \uac19\uc740 \ud654\uba74\uc774 \ubcf4\uc774\uace0 \uc5ec\uae30\uc5d0\uc11c \u23e9 \ubc84\ud2bc\uc744 \ub204\ub985\ub2c8\ub2e4. \uba85\ub839 \uc9c4\ud589 \ud6c4 1_table<\/code> \ub514\ub809\ud1a0\ub9ac\uc5d0 5\uac1c\uc758 excel \ud30c\uc77c\uc774 \uc0dd\uc131\ub429\ub2c8\ub2e4. \uac01 \ud30c\uc77c\uc744 \uc6b0\ud074\ub9ad\ud558\uace0 ‘download’ \uba85\ub839\uc744 \uc120\ud0dd\ud569\ub2c8\ub2e4. \ubcf4\uc548 \uc815\ucc45 \uad00\ub828 \uacbd\uace0\ub294 \ubb34\uc2dc\ud558\uace0 \ud30c\uc77c\uc744 \ubc1b\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

1-3. \ub370\uc774\ud130 \uc218\uc815\ud558\uae30<\/h4>\n\n\n\n

Excel \ud30c\uc77c\uc758 \ub370\uc774\ud130\ub97c \uc218\uc815\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

(\uc8fc\uc758 \uc0ac\ud56d 1) id<\/code> \ub294 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0\uc11c \uac01 \ub370\uc774\ud130\ub97c \uc2dd\ubcc4\ud558\uae30 \uc704\ud55c \uac12\uc73c\ub85c \uc808\ub300 \uc784\uc758\ub85c \ubcc0\uacbd\ud574\uc11c\ub294 \uc548 \ub429\ub2c8\ub2e4.<\/p>\n\n\n\n

(\uc8fc\uc758 \uc0ac\ud56d 2) \ud3b8\uc758\uc0c1 \ud574\ub2f9 \ud14c\uc774\ube14\uc758 \ub370\uc774\ud130 \uc774\uc678\uc758 chart_index\uc640 hospital_id, name\uc744 \uac19\uc774 \ucd9c\ub825\ud558\uc600\uc2b5\ub2c8\ub2e4. \ud574\ub2f9 \ud56d\ubaa9\uc740 “supp_” suffix\ub97c \uc774\uc6a9\ud574 \ud45c\uae30\ub418\uc5b4 \uc788\uace0, \ud574\ub2f9 \ud56d\ubaa9\uc758 \uac12\uc744 \ubcc0\uacbd\ud558\uc5ec\ub3c4 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0\uc11c \ubcc0\uacbd\ub418\uc9c0 \uc54a\uc2b5\ub2c8\ub2e4. \uc774 \uac12\ub4e4\uc744 \ubcc0\uacbd\ud558\uae30 \uc704\ud574\uc11c\ub294 \uc6d0 \ub370\uc774\ud130\ub97c \ubcc0\uacbd\ud574\uc57c \ud569\ub2c8\ub2e4. \uc608\ub97c \ub4e4\uc5b4 \uc774\ub984\uc744 \ubcc0\uacbd\ud558\uae30 \uc704\ud574\uc11c\ub294 individual.xlsl<\/code> \ud30c\uc77c\uc758 private<\/code> sheet\uc758 name<\/code> \ud56d\ubaa9\uc758 \uac12\uc744 \ubcc0\uacbd\ud558\uace0 update<\/code> \ud574\uc57c \ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

(\uc8fc\uc758 \uc0ac\ud56d 3) excel\uc5d0 \uc0c8\ub85c\uc6b4 \ud56d\ubaa9\uc744 \ucd94\uac00\ud558\uc5ec\ub3c4 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0 \ubc18\uc601\ub418\uc9c0\ub294 \uc54a\uc2b5\ub2c8\ub2e4. \ub370\uc774\ud130 \uc804\uccb4 \uad6c\uc870\ub97c \ubcc0\uacbd\ud574\uc57c \ud558\ub294 \uc0ac\ud56d\uc774\ubbc0\ub85c, \uba3c\uc800 \uad00\ub9ac\uc790\uc5d0\uac8c \uc5f0\ub77d\ud574\uc11c \ubcc0\uacbd\ud55c \ud6c4, \ub2e4\uc2dc \ucd9c\ub825\ud558\uace0 \uc785\ub825\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

1-4. \uc218\uc815 \ub0b4\uc5ed \ubc18\uc601\ud558\uae30<\/h4>\n\n\n\n

\uc218\uc815 \ud55c excel \ud30c\uc77c\uc744 \uc11c\ubc84\uc758 2_update<\/code> \ub514\ub809\ud1a0\ub9ac\uc5d0 \ubcf5\uc0ac \ud569\ub2c8\ub2e4. \ud574\ub2f9 \ub514\ub809\ud1a0\ub9ac\ub97c \uc5f4\uace0 file navigation panel (\uc67c\ucabd \ud328\ub110)\ub85c \ud30c\uc77c\uc744 drag & drop \ud574\uc11c \ubcf5\uc0ac\ud560 \uc218 \uc788\uc2b5\ub2c8\ub2e4. \ub2e4\uc74c\uc73c\ub85c, 2_update.ipynb<\/code> \ud30c\uc77c\uc744 \uc5f4\uace0 \u23e9 \ubc84\ud2bc\uc744 \ub204\ub985\ub2c8\ub2e4.<\/p>\n\n\n\n

\uc218\uc815 \ubc18\uc601 \uc0ac\ud56d\uc774 \uc788\uc73c\uba74 \ucd9c\ub825\ub429\ub2c8\ub2e4. \uac01\uac01\uc758 \ud30c\uc77c\uc740 diagnosis<\/code>, individual<\/code>, medication<\/code>, samples<\/code>, tests<\/code>\ub85c \uc2dc\uc791\ud574\uc57c \ud569\ub2c8\ub2e4. \ud574\ub2f9 suffix \ub4a4\uc5d0 \ucd94\uac00\uc801\uc778 \uc815\ubcf4\ub97c \uc785\ub825\ud560 \uc218 \ub3c4 \uc788\uc2b5\ub2c8\ub2e4. \uc608\ub97c \ub4e4\uc5b4 diagnosis_240710.xlsx<\/code> \uacfc \uac19\uc740 \ud30c\uc77c \uc774\ub984\uc744 \uc0ac\uc6a9\ud560 \uc218 \uc788\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

(\uc8fc\uc758 \uc0ac\ud56d) 2_update<\/code> \ud3f4\ub354\uc758 \ubaa8\ub4e0 \ud30c\uc77c\uc5d0 \ub300\ud55c update\uac00 \uc9c4\ud589\ub429\ub2c8\ub2e4. \uc774\ubbf8 \uc5c5\ub370\uc774\ud2b8\ub97c \uc9c4\ud589\ud588\ub2e4\uba74, \ud574\ub2f9 \ud30c\uc77c\uc744 \uc0ad\uc81c\ud574\uc57c \ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

(\uc8fc\uc758 \uc0ac\ud56d) \uc218\uc815\uc2dc \uc5c5\ub85c\ub4dc \ud558\ub294 file\uc5d0 \uc788\ub294 \uac12\uc774 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc758 \uac12\uacfc \uac19\uc740 \uacbd\uc6b0 \ubb34\uc2dc\ub429\ub2c8\ub2e4.<\/p>\n\n\n\n

\"\"<\/figure>\n\n\n\n

2. Fetch – \ub370\uc774\ud130 \ubc1b\uae30<\/h3>\n\n\n\n

Update\ub97c \uc124\uba85\ud558\uba74\uc11c \ub370\uc774\ud130\ubca0\uc774\uc2a4 \uac12\uc744 \ubc1b\ub294 \ubc29\ubc95\uc740 \uc124\uba85\ud558\uc600\uc73c\ub098, \uac04\ub7b5\ud788 \ub2e4\uc2dc \uc124\uba85\ud569\ub2c8\ub2e4. \uc11c\ubc84\uc5d0 \uc811\uc18d\ud558\uc5ec 1_fetch.ipynb<\/code> notebook \ud30c\uc77c\uc744 \uc5f4\uace0, \u23e9 \ubc84\ud2bc\uc744 \ub204\ub974\uba74, \uc11c\ubc84\ub294 \ub370\uc774\ud130\ubca0\uc774\uc2a4\uc5d0\uc11c \uc804\uccb4 \ub370\uc774\ud130\ub97c \ubc1b\uace0 \uc774\ub97c excel \ud30c\uc77c\ub85c \ubcc0\ud658\ud569\ub2c8\ub2e4. \ubcc0\ud658\ub41c \ud30c\uc77c\uc740 1_table<\/code> \ub514\ub809\ud1a0\ub9ac\uc5d0\uc11c \ud655\uc778\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

1_table<\/code>\uc740 \uc804\uccb4 \ub370\uc774\ud130\ub97c \ubcf4\uc5ec\uc8fc\uace0, \ub370\uc774\ud130 \uc785\ub825\uc744 \ub3d5\uae30 \uc704\ud574 \ud658\uc790\ubc88\ud638\uc640 \ud658\uc790\uba85\uacfc \uac19\uc740 \ucd94\uac00 \uc815\ubcf4\ub97c \ud45c\uae30\ud558\uc600\uc2b5\ub2c8\ub2e4. \ud574\ub2f9 \uc815\ubcf4 \uc774\uc678\uc758 \uc815\ubcf4\uac00 \ud544\uc694\ud560 \uc218\ub3c4 \uc788\uc744 \uac83 \uac19\uc2b5\ub2c8\ub2e4. \uc5b4\ub5a4 \uc815\ubcf4\uac00 \ud544\uc694\ud55c\uc9c0 \uc54c\ub824\uc8fc\uc2dc\uba74 \ud574\ub2f9 \uc815\ubcf4\ub3c4 \uac19\uc774 \ud45c\uae30\ud560 \uc218 \uc788\uc73c\ub2c8 \uc54c\ub824\uc8fc\uc2dc\uae30 \ubc14\ub78d\ub2c8\ub2e4.<\/p>\n\n\n\n

3. Insert – \uc2e0\uaddc \ub370\uc774\ud130 \uc785\ub825<\/h3>\n\n\n\n

\uc2e0\uaddc \ub370\uc774\ud130\ub294 \uc544\ub798\uc758 template excel\uc744 \uc791\uc131\ud558\uc5ec \uc9c4\ud589\ud569\ub2c8\ub2e4. \uc2e0\uaddc \ub370\uc774\ud130 \uc785\ub825\uc2dc \uac01 table\uc5d0 iid<\/code> \ud56d\ubaa9\uc774 \uaf2d \ud544\uc694\ud569\ub2c8\ub2e4. \uc774 \ud56d\ubaa9\uc744 \uc774\uc6a9\ud574\uc11c \ubaa8\ub4e0 \ub370\uc774\ud130\uac00 \uc5f0\uacb0\ub418\uae30 \ub54c\ubb38\uc785\ub2c8\ub2e4. \uadf8\ub9ac\uace0, \uc774\ubbf8 \uc785\ub825\ud55c \uac12\uc774 \ub2e4\uc2dc \uc785\ub825\ub418\uc9c0 \uc54a\ub3c4\ub85d \uc8fc\uc758\ud574\uc57c \ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

3-1. \uc2e0\uaddc \ub370\uc774\ud130 \ud30c\uc77c \uc791\uc131<\/h4>\n\n\n\n

\uc544\ub798 template \ud30c\uc77c\uc744 \uc774\uc6a9\ud558\uc5ec \uc2e0\uaddc \ub370\uc774\ud130\ub97c \uc785\ub825\ud569\ub2c8\ub2e4. \uc0c8\ub85c\uc6b4 \ud56d\ubaa9\uc744 \uc791\uc131\ud560 \ub54c\ub294 \uc544\ub798 \ud30c\uc77c\uc744 download \ud558\uace0 \uc0c8\ub85c \uc791\uc131\ud558\ub294 \uac83\uc744 \ucd94\ucc9c\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

individual_insert<\/a>Download<\/a><\/div>\n\n\n\n
medication_insert<\/a>Download<\/a><\/div>\n\n\n\n
samples_insert<\/a>Download<\/a><\/div>\n\n\n\n
tests_insert<\/a>Download<\/a><\/div>\n\n\n\n
diagnosis_insert<\/a>Download<\/a><\/div>\n\n\n\n

3-2. \ud30c\uc77c \uc5c5\ub85c\ub4dc<\/h4>\n\n\n\n

\uc791\uc131\ud55c \ud30c\uc77c\uc744 \uc6f9\uc11c\ubc84\uc758 3_insert<\/code> \ub514\ub809\ud1a0\ub9ac\uc5d0 \ubcf5\uc0ac\ud569\ub2c8\ub2e4. \uac00\ub2a5\ud558\uba74 insertion\uc774 \ub05d\ub09c \ud30c\uc77c\uc740 \uc0ad\uc81c\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

3-3. \ub370\uc774\ud130 \uc785\ub825<\/h4>\n\n\n\n

3_insert.ipynb<\/code> \ud30c\uc77c\uc744 \uc5f4\uace0 \u23e9 \ubc84\ud2bc\uc744 \ub20c\ub824 \uc2e4\ud589\ud558\uba74, 3_insert<\/code>\uc758 \ud30c\uc77c\uc744 \uc77c\uace0, \ub370\uc774\ud130\ubca0\uc774\uc2a4\ub97c \uc5c5\ub370\uc774\ud2b8 \ud569\ub2c8\ub2e4. \uc0c8\ub85c \uc785\ub825\ub418\ub294 \ub370\uc774\ud130\uc5d0 \ub300\ud55c \uc815\ubcf4\uac00 \ud654\uba74\uc5d0 \ucd9c\ub825\ub429\ub2c8\ub2e4. \uc624\ub958\uac00 \uc788\ub294 \uac12\uc744 \ud655\uc778\ud558\uace0, \ud574\ub2f9 \uc785\ub825\uc5d0 \ub300\ud574\uc11c\ub294 \uc0c8\ub85c\uc6b4 insert \ud30c\uc77c\uc744 \ub9cc\ub4e4\uace0 \uac12\uc744 \ub2e4\uc2dc \uc785\ub825\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

4. delete – \ub370\uc774\ud130 \uc0ad\uc81c<\/h3>\n\n\n\n

\ud55c\ubc88 \uc0ad\uc81c\ud55c \ub370\uc774\ud130\ub294 \ubcf5\uc6d0\uc774 \uc5b4\ub824\uc6b0\ub2c8 \uc0ad\uc81c\ub294 \ub9e4\uc6b0 \uc2e0\uc911\ud558\uac8c \uc9c4\ud589\ud574\uc57c \ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

4-1. \ub370\uc774\ud130 \ubc1b\uae30<\/h4>\n\n\n\n

\ub370\uc774\ud130\ub97c \uc0ad\uc81c\ud558\uae30 \uc704\ud574\uc11c\ub294 \uc0ad\uc81c\ud560 \ud56d\ubaa9\uc5d0 \ub300\ud55c id<\/code> \ub97c \uc54c\uc544\uc57c \ud569\ub2c8\ub2e4. \uc774\ub97c \uc704\ud574\uc11c 1_fetch.ipynb<\/code> \ub178\ud2b8\ubd81\uc744 \uc774\uc6a9\ud574 \ub370\uc774\ud130\ubca0\uc774\uc2a4\ub85c \ubd80\ud130 \uac00\uc7a5 \ucd5c\uadfc \ub370\uc774\ud130\ub97c \ubc1b\uc2b5\ub2c8\ub2e4. \uadf8\ub9ac\uace0, \ud574\ub2f9 table\uc5d0\uc11c \uc0ad\uc81c\ud560 \ub370\uc774\ud130\uc758 id<\/code> \uac12\uc744 \uae30\ub85d\ud558\uace0, \uc774\ub97c \uc0ad\uc81c\ub97c \uc704\ud55c excel \ud30c\uc77c\uc5d0 \uae30\ub85d\ud569\ub2c8\ub2e4. \uc774 \ud30c\uc77c\uc740 \ub2e4\uc74c sub-section\uc5d0\uc11c \uc124\uba85\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

4-2. \uc0ad\uc81c \ud30c\uc77c \ub9cc\ub4e4\uae30<\/h4>\n\n\n\n

\ub370\uc774\ud130 \uc0ad\uc81c\ub97c \uc704\ud55c \ud30c\uc77c\ub3c4 update, insert\uc640 \uac19\uc740 \ube44\uc2b7\ud55c \ud30c\uc77c\uba85\uc744 \uc9c0\ub2c8\uace0 \uc788\uc2b5\ub2c8\ub2e4. \ud558\uc9c0\ub9cc, \uac01 table\uc740 id<\/code> \ud56d\ubaa9\ub9cc \uac00\uc9c0\uace0 \uc788\uc2b5\ub2c8\ub2e4. \uac01 table\uc5d0\uc11c \ud574\ub2f9 id<\/code>\ub97c \uac00\uc9c4 \ud56d\ubaa9\uc744 \uc81c\uac70\ud558\uac8c \ub429\ub2c8\ub2e4.<\/p>\n\n\n\n

medication_delete<\/a>Download<\/a><\/div>\n\n\n\n
samples_delete<\/a>Download<\/a><\/div>\n\n\n\n
tests_delete<\/a>Download<\/a><\/div>\n\n\n\n
diagnosis_delete<\/a>Download<\/a><\/div>\n\n\n\n
individual_delete<\/a>Download<\/a><\/div>\n\n\n\n

4-3. \uc0ad\uc81c\ud558\uae30<\/h4>\n\n\n\n

\uc0ad\uc81c\ud560 \ub370\uc774\ud130\uc758 id<\/code>\ub97c excel \ud30c\uc77c\ub4e4\uc5d0 \uae30\ub85d\ud558\uc600\ub2e4\uba74, \uc774 \ud30c\uc77c\uc744 \uc11c\ubc84\uc758 4_delete<\/code> \ub514\ub809\ud1a0\ub9ac\uc5d0 \ubcf5\uc0ac\ud569\ub2c8\ub2e4. \uc774\uc5b4\uc11c 4_delete.ipynb<\/code> \uba85\ub839\uc744 \uc2e4\ud589\ud558\uc5ec, \ud574\ub2f9 \ub370\uc774\ud130\ub97c \uc11c\ubc84\uc5d0\uc11c \uc0ad\uc81c\ud560 \uc218 \uc788\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

\ubc29\ubc95<\/h2>\n\n\n\n

1. Google datasheet<\/h3>\n\n\n\n

\uc784\uc0c1\ub370\uc774\ud130 \uc6d0 \uc790\ub8cc<\/p>\n\n\n\n

    \n
  • https:\/\/docs.google.com\/spreadsheets\/d\/1pwMJGcHiWGTcm519vDYbn7-elVlp6EBC4KmlukohVSQ\/edit#gid=0<\/li>\n<\/ul>\n\n\n\n

    2. Data inspection and classification<\/h3>\n\n\n\n

    \uc804\uccb4 \ub370\uc774\ud130\uc758 \ud56d\ubaa9\uc744 \ubd84\uc11d\ud558\uc5ec format\uc744 \ubcc0\uacbd\ud558\uc600\uc2b5\ub2c8\ub2e4. \uc6d0\ub798\uc758 1\uac1c\uc758 \ud30c\uc77c\uc744 Individual, Diagnosis, Medication, Samples, Tests\uc758 \ub2e4\uc12f \uac00\uc9c0 \ud56d\ubaa9 (category)\ub97c \uc815\uc758\ud558\uace0, 5\uac1c\uc758 excel \ud30c\uc77c\ub85c \ubd84\ub9ac\ud558\uc600\uc2b5\ub2c8\ub2e4. \uac01\uac01\uc758 \ud30c\uc77c\uc5d0\ub294 \ud574\ub2f9 \uc815\ubcf4\ub4e4\uc774 table \ud615\ud0dc\ub85c \ubd84\ub9ac\ud558\uc600\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

    3. Database models<\/h3>\n\n\n\n

    \ubd84\uc11d\ud55c \ub370\uc774\ud130\uc5d0 \uc758\ud574 \uc804\uccb4 \ub370\uc774\ud130 model\uc744 \uad6c\uc131\ud558\uc600\uc2b5\ub2c8\ub2e4. \uc6d0 \ub370\uc774\ud130\uc758 table\uc744 \ubd84\ub9ac\ud574\uc11c \uac1c\ubcc4 table\uc744 \uad6c\uc131\ud588\ub2e4\uace0 \uc0dd\uac01\ud558\uc2dc\uba74 \ub429\ub2c8\ub2e4. \ud14c\uc774\ube14 \uc18d\uc131 (colume \uc774\ub984)\uc740 \uc601\ubb38\uc73c\ub85c \uc9c0\uc815\ud574\uc57c \ud558\uae30 \ub54c\ubb38\uc5d0 \uc18d\uc131 \uac12\uc744 \uc601\ubb38\uc73c\ub85c \uad50\uccb4\ud558\uc600\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

    \ucd1d 18\uac1c\uc758 table\uc744 \uad6c\uc131\ud558\uc600\uace0, \ubaa8\ub4e0 table\uc740 iid<\/code>\ub77c\ub294 \uc18d\uc131\uc744 \uc9c0\ub2c8\uace0 \uc788\uc73c\uba70, \uc774\ub294 \uac1c\ubcc4 \uc0ac\ub78c\uc744 \uc9c0\uce6d\ud558\ub294 \uac12\uc785\ub2c8\ub2e4.<\/p>\n\n\n\n

    3-1. MySQL data model \uad6c\uc131<\/h4>\n\n\n\n

    \uc804\uccb4 \ub370\uc774\ud130\ub97c \ubc14\ud0d5\uc73c\ub85c data table\uc744 \ub9cc\ub4e4\uc5c8\uc2b5\ub2c8\ub2e4. \ucc38\uace0\ub85c individual table\uc740 \uac1c\uc778\uc5d0 \ub300\ud55c index\uc778 iid\ub97c \uac00\uc9c0\uace0 \uc788\uace0, chart_index\uc640, hospital_category (\ubcd1\uc6d0 index), \uc131\ubcc4, \ud0a4 \ub4f1\uc758 \uc815\ubcf4\ub97c \uac00\uc9c0\uace0 \uc788\uc2b5\ub2c8\ub2e4. \uc774\ub294 \uc544\ub798\uc640 \uac19\uc740 \ud56d\ubaa9\uc744 \ud3ec\ud568\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n\n\n

      \n
    • \ub370\uc774\ud130 \ubaa8\ub378 \ud30c\uc77c ![[snu_data_curation.mwb]]<\/li>\n<\/ul>\n\n\n\n
      \"\"<\/figure>\n\n\n\n

      3-2. (\uc608\uc2dc) Individual<\/h4>\n\n\n\n

      \uac1c\uc778\uc5d0 \ub300\ud55c \uc815\ubcf4\ub294 \uc544\ub798\uc640 \uac19\uc740 \ud14c\uc774\ube14\ub85c \uc815\ub9ac\ud558\uc600\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

      \"\"<\/figure>\n\n\n\n

      3-3. (\uc608\uc2dc) \uac1c\uc778 \uc815\ubcf4<\/h4>\n\n\n\n

      \uac1c\uc778 \uc815\ubcf4\uc640 \uad00\ub828\ub41c \ub370\uc774\ud130\ub294 private \ud14c\uc774\ube14\uc5d0 \uc788\uc73c\uba70 \uc544\ub798\uc640 \uac19\uc740 \uc815\ubcf4\ub97c \uac00\uc9c0\uace0 \uc788\uc2b5\ub2c8\ub2e4. \ubcd1\uc6d0 index\uc640 \uc774\ub984, \uc0dd\ub144\uc6d4\uc77c \uc815\ubcf4\ub97c \ud3ec\ud568\ud558\uc600\uc2b5\ub2c8\ub2e4. \uac1c\uc778\uc815\ubcf4 \ubcf4\uad00 \uae30\ud55c \ucd08\uacfc \uc2dc \ud574\ub2f9 \uc815\ubcf4\ub97c \uc77c\uad04 \uc0ad\uc81c\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

      \"\"<\/figure>\n\n\n\n

      4. Database server<\/h3>\n\n\n\n

      MySQL database\uc758 \uad6c\uc131\uc740 \uc544\ub798\uc640 \uac19\uc2b5\ub2c8\ub2e4. Web server\uc640 \ubd84\ub9ac\ub418\ub294 \uc11c\ubc84\ub85c, \uc6f9\uc11c\ubc84\uc5d0\uc11c \ud574\ub2f9 \uc11c\ubc84\ub85c \uc811\uc18d\ud574\uc11c \ub370\uc774\ud130\ub97c \uac00\uc838\uc635\ub2c8\ub2e4.<\/p>\n\n\n\n

        \n
      • \uc11c\ubc84: BDSL-ds, MySQL<\/li>\n\n\n\n
      • Database: snu<\/li>\n<\/ul>\n\n\n\n

        5. Web server<\/h3>\n\n\n\n

        \ub370\uc774\ud130 \uad00\ub9ac \uc11c\ubc84\ub294 \uc544\ub798 URL\uc744 \uc774\uc6a9\ud574 \uc811\uc18d \uac00\ub2a5\ud569\ub2c8\ub2e4.<\/p>\n\n\n\n

        http:\/\/bdsl.jbnu.ac.kr:13000<\/p>\n\n\n\n

        6. \ub370\uc774\ud130 \ud56d\ubaa9 \ubd84\uc11d – 5 categories – reformated input data file<\/h3>\n\n\n\n

        \uc6d0 \ub370\uc774\ud130\uc758 \ub0b4\uc6a9\uc744 \ubc14\ud0d5\uc73c\ub85c, \ub370\uc774\ud130\ub97c 5\uac1c \ud56d\ubaa9, 18\uac1c table\ub85c \ubd84\ub9ac\ud558\uc600\uc2b5\ub2c8\ub2e4. 5\uac1c\uc758 \ud56d\ubaa9\uc740 Individual, Diagnosis, Medication, Samples, Tests \uc774\uba70 \uac01\uac01 \uac1c\uc778\uc5d0 \ub300\ud55c \uc815\ubcf4, \uc9c4\ub2e8 \uc815\ubcf4, \ud22c\uc57d \uc815\ubcf4, \uc0d8\ud50c \uc815\ubcf4, \uce21\uc815 \uc815\ubcf4\ub97c \ud3ec\ud568\ud558\uace0 \uc788\uc2b5\ub2c8\ub2e4.<\/p>\n\n\n\n

          \n
        • Individual\n
            \n
          • individual – \uae30\ubcf8 \uc815\ubcf4<\/li>\n\n\n\n
          • private – \uac1c\uc778 \uc815\ubcf4<\/li>\n\n\n\n
          • status – \uc0c1\ud0dc \uc815\ubcf4<\/li>\n<\/ul>\n<\/li>\n\n\n\n
          • Diagnosis\n
              \n
            • diagnosis – \uc9c4\ub2e8 \uc815\ubcf4<\/li>\n\n\n\n
            • UC – UC \uad00\ub828 \uc9c4\ub2e8 \uc815\ubcf4<\/li>\n\n\n\n
            • CD – CD \uad00\ub828 \uc9c4\ub2e8 \uc815\ubcf4<\/li>\n<\/ul>\n<\/li>\n\n\n\n
            • Medication\n
                \n
              • medication_init – \ucd5c\ucd08 \ub4f1\ub85d \uc2dc \uce58\ub8cc \uc815\ubcf4<\/li>\n\n\n\n
              • current_biologics – \uc0dd\ubb3c\ud559\uc81c\uc81c \uc0ac\uc6a9 \uc0c1\ud0dc<\/li>\n\n\n\n
              • biologics – \uc0dd\ubb3c\ud559\uc81c\uc81c \uc0ac\uc6a9 \uae30\ub85d<\/li>\n<\/ul>\n<\/li>\n\n\n\n
              • Samples\n
                  \n
                • stool – \ubd84\ubcc0 \uc0d8\ud50c<\/li>\n\n\n\n
                • blood_serum – \ud608\uc561 \uc0d8\ud50c<\/li>\n\n\n\n
                • tissue – \uc870\uc9c1 \uc0d8\ud50c<\/li>\n\n\n\n
                • tissue_summary – \uc870\uc9c1 \uc0d8\ud50c \uc804\uccb4\uc5d0 \ub300\ud55c \uc815\ubcf4<\/li>\n<\/ul>\n<\/li>\n\n\n\n
                • Tests\n
                    \n
                  • endoscopy – \ub0b4\uc2dc\uacbd \uc2e4\ud5d8 \uacb0\uacfc<\/li>\n\n\n\n
                  • entero – \ub0b4\uc2dc\uacbd \uc2e4\ud5d8 \uacb0\uacfc<\/li>\n\n\n\n
                  • radiology – \ubc29\uc0ac\uc120 \uc2e4\ud5d8 \uacb0\uacfc<\/li>\n\n\n\n
                  • laboratory – \ud608\uc561 \uc2e4\ud5d8 \uacb0\uacfc<\/li>\n\n\n\n
                  • outcome – \uce58\ub8cc \uacb0\uacfc?<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"

                    \uc694\uc57d \uc784\uc0c1 \ub370\uc774\ud130\uc758 \uccb4\uacc4\uc801 \uc218\uc9d1 \ubc0f \uad00\ub9ac\ub97c \uc704\ud574 \ub370\uc774\ud130\ub97c \uc7ac\uad6c\uc131\ud558\uc600\uc2b5\ub2c8\ub2e4. 1\uac1c\uc758 \ud45c\uc5d0 \ubaa8\ub4e0 \uc815\ubcf4\ub97c \uae30\ub85d\ud558\uace0 \uc788\ub358 \uae30\uc874 \ub370\uc774\ud130 \uc218\uc9d1 \uccb4\uacc4\ub97c 5\uac1c\uc758 excel \ud30c\uc77c, 18\uac1c\uc758 table\ub85c \ubd84\ub9ac\ud558\uc600\uace0, \uae30\uc874 \uc790\ub8cc (2024\ub144 6\uc6d4 28\uc77c \uae30\uc900) \ub0b4\uc6a9\uc744 \uc785\ub825\ud558\uc600\uc2b5\ub2c8\ub2e4. \ube44\uc2b7\ud55c \uc758\ubbf8\ub97c \uc9c0\ub2cc \ub2e8\uc704\ub97c \ub370\uc774\ud130\ub97c \ubd84\ub958\ud558\uc5ec, \uac01\uac01\uc758 \ub370\uc774\ud130\ub97c \uc27d\uac8c \uad00\ub9ac\ud558\ub294 \uac83\uc774 \ubaa9\uc801\uc785\ub2c8\ub2e4. \ub370\uc774\ud130 \uad00\ub9ac \uce21\uba74\uc5d0\uc11c\ub294 \ucd9c\ub825 (fetch), \uc785\ub825 (insert), \uc218\uc815 (update), […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_uag_custom_page_level_css":"","site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"","adv-header-id-meta":"","stick-header-meta":"","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"set","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"var(--ast-global-color-4)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"ast-content-background-meta":{"desktop":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"footnotes":"","_members_access_role":[],"_members_access_error":""},"categories":[1],"tags":[],"class_list":["post-3808","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"yoast_head":"\nSNUH data curation - Biomedical Data Science Laboratory<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/bdsl.jbnu.ac.kr\/blog\/snuh-data-curation\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"SNUH data curation - Biomedical Data Science Laboratory\" \/>\n<meta property=\"og:description\" content=\"\uc694\uc57d \uc784\uc0c1 \ub370\uc774\ud130\uc758 \uccb4\uacc4\uc801 \uc218\uc9d1 \ubc0f \uad00\ub9ac\ub97c \uc704\ud574 \ub370\uc774\ud130\ub97c \uc7ac\uad6c\uc131\ud558\uc600\uc2b5\ub2c8\ub2e4. 1\uac1c\uc758 \ud45c\uc5d0 \ubaa8\ub4e0 \uc815\ubcf4\ub97c \uae30\ub85d\ud558\uace0 \uc788\ub358 \uae30\uc874 \ub370\uc774\ud130 \uc218\uc9d1 \uccb4\uacc4\ub97c 5\uac1c\uc758 excel \ud30c\uc77c, 18\uac1c\uc758 table\ub85c \ubd84\ub9ac\ud558\uc600\uace0, \uae30\uc874 \uc790\ub8cc (2024\ub144 6\uc6d4 28\uc77c \uae30\uc900) \ub0b4\uc6a9\uc744 \uc785\ub825\ud558\uc600\uc2b5\ub2c8\ub2e4. \ube44\uc2b7\ud55c \uc758\ubbf8\ub97c \uc9c0\ub2cc \ub2e8\uc704\ub97c \ub370\uc774\ud130\ub97c \ubd84\ub958\ud558\uc5ec, \uac01\uac01\uc758 \ub370\uc774\ud130\ub97c \uc27d\uac8c \uad00\ub9ac\ud558\ub294 \uac83\uc774 \ubaa9\uc801\uc785\ub2c8\ub2e4. \ub370\uc774\ud130 \uad00\ub9ac \uce21\uba74\uc5d0\uc11c\ub294 \ucd9c\ub825 (fetch), \uc785\ub825 (insert), \uc218\uc815 (update), […]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/bdsl.jbnu.ac.kr\/blog\/snuh-data-curation\/\" \/>\n<meta property=\"og:site_name\" content=\"Biomedical Data Science Laboratory\" \/>\n<meta property=\"article:published_time\" content=\"2024-07-10T06:53:48+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/bdsl.jbnu.ac.kr\/blog\/wp-content\/uploads\/2024\/07\/Pasted-image-20240710145053-1024x681.png\" \/>\n<meta name=\"author\" content=\"sphong\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"sphong\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"6 minutes\" \/>\n<script type=\"application\/ld+json\" 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