Publications

Rosa gallica and its active compound, cyanidin‐3,5‐O‐diglucoside, improve skin hydration via the GLK signaling pathway

Seo, J., Jo, S., Jung, Y. S., Mijan, M., Cha, J., Hong, S., Byun, S., & Lim, T.

BioFactors, 2022

Acceptor dependent catalytic properties of GH57 4-α-glucanotransferase from Pyrococcus sp. ST04.

Jung, J. H., Hong, S., Jeon, E. J., Kim, M. K., Seo, D. H., Woo, E. J., Holden, J. F., & Park, C. S.

Frontiers in Microbiology, 2022, 13.

8-Shogaol inhibits rheumatoid arthritis through targeting TAK1.

Jo, S., Samarpita, S., Lee, J. S., Lee, Y. J., Son, J. E., Jeong, M., Kim, J. H., Hong, S., Yoo, S. A., Kim, W. U., Rasool, M., & Byun, S.

Pharmacological Research, 2022, 178.

Diagnostic and prognostic potential of the oral and gut microbiome for lung adenocarcinoma.

Lim, M. Y., Hong, S., Hwang, K. H., Lim, E. J., Han, J., & Nam, Y.

Clinical and Translational Medicine, 2021, 11(9), e508.

Gut microbiome structure and association with host factors in a Korean population.

Lim, M. Y., Hong, S., Bang, S.-J., Chung, W.-H., Shin, J.-H., Kim, J.-H., & Nam, Y.-D.

mSystems, 2021, 6(4), e0017921.

Biosynthesis of glyceride glycoside (nonionic surfactant) by amylosucrase, a powerful glycosyltransferase.

Kim, Y.-J., Siziya, I. N., Hong, S., Lee, G.-Y., Seo, M.-J., Kim, Y.-R., Yoo, S.-H., Park, C.-S., & Seo, D.-H.

Food Science and Biotechnology, 2021, 30(2), 267–276.

Mir214-3p and Hnf4a/Hnf4α reciprocally regulate Ulk1 expression and autophagy in nonalcoholic hepatic steatosis.

Lee, D.-H., Park, S.-H., Ahn, J., Hong, S. P., Lee, E., Jang, Y.-J., Ha, T.-Y., Huh, Y. H., Ha, S.-Y., Jeon, T.-I., & Jung, C. H.

Autophagy, 2021, 17(9), 2415–2431.

Effect of Saengshik Supplementation on the Gut Microbial Composition of Healthy Korean Adults: A Single-Group Pilot Study.

Shin, J.-H., Ahn, Y. J., Chung, W.-H., Lim, M. Y., Hong, S., Kim, J.-H., Park, M. H., & Nam, Y.-D.

Frontiers in Nutrition, 2021, 8, 1–12.

Association between gut microbiome and frailty in the older adult population in Korea.

Lim, M. Y., Hong, S., Kim, J.-H., & Nam, Y.-D.

The Journals of Gerontology. Series A, Biological Sciences and Medical Sciences, 2021, 76(8), 1362–1368.

Changes in microbiome and metabolomic profiles of fecal samples stored with stabilizing solution at room temperature: a pilot study.

Lim, M. Y., Hong, S., Kim, B.-M., Ahn, Y., Kim, H., & Nam, Y.-D.

Scientific Reports, 2020, 10(1), 1789.

Molecular Docking and Kinetic Studies of the A226N Mutant of Deinococcus geothermalis Amylosucrase with Enhanced Transglucosylation Activity.

Hong, S., Siziya, I. N., Seo, M.-J., Park, C.-S., & Seo, D.-H.

Journal of Microbiology and Biotechnology, 2020, 30(9), 1436–1442.

Propolis suppresses uv‐induced photoaging in human skin through directly targeting phosphoinositide 3‐kinase.

Kim, D. H., Auh, J. H., Oh, J., Hong, S., Choi, S., Shin, E. J., Woo, S. O., Lim, T. G., & Byun, S.

Nutrients, 2020, 12(12), 1–12.

Piceatannol reduces resistance to statins in hypercholesterolemia by reducing PCSK9 expression through p300 acetyltransferase inhibition.

Kim, H.-J., Lee, J., Chung, M.-Y., Hong, S., Park, J. H., Lee, S.-H., Park, S. W., Choi, H.-K., & Hwang, J.-T.

Pharmacological Research, 2020, 161, 105205.

Engineering Clostridial Aldehyde/Alcohol Dehydrogenase for Selective Butanol Production.

Cho, C., Hong, S., Moon, H. G., Jang, Y.-S., Kim, D., & Lee, S. Y.

mBio, 2019, 10(1), e02683-18.

Quercetin Directly Targets JAK2 and PKCδ and Prevents UV-Induced Photoaging in Human Skin.

Shin, E. J., Lee, J. S., Hong, S., Lim, T.-G., & Byun, S.

International Journal of Molecular Sciences, 2019, 20(21), 5262.

KRDS: a web server for evaluating drug resistance mutations in kinases by molecular docking.

Lee, A., Hong, S., & Kim, D.

Journal of Cheminformatics, 2018, 10(1), 20.

Computational characterization of chromatin domain boundary-associated genomic elements.

Hong, S., & Kim, D.

Nucleic Acids Research, 2017, 45(18), 10403–10414.

Library of binding protein scaffolds (LibBP): a computational platform for selection of binding protein scaffolds.

Hong, S., & Kim, D.

Bioinformatics, 2016, 32(11), 1709–1715.

Interaction between bound water molecules and local protein structures: A statistical analysis of the hydrogen bond structures around bound water molecules.

Hong, S., & Kim, D.

Proteins, 2016, 84(1), 43–51.

Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering.

Lee, S.-C., Park, K., Han, J., Lee, J. -j., Kim, H. J., Hong, S., Heu, W., Kim, Y. J., Ha, J.-S., Lee, S.-G., Cheong, H.-K., Jeon, Y. H., Kim, D., & Kim, H.-S.

Proceedings of the National Academy of Sciences, 2012, 109(9), 3299–3304.

Structure-based rational design of a Toll-like receptor 4 (TLR4) decoy receptor with high binding affinity for a target protein.

Han, J., Kim, H. J., Lee, S.-C., Hong, S., Park, K., Jeon, Y. H., … Kim, H.-S.

PloS One, 2012, 7(2), e30929.

SH3 domain-peptide binding energy calculations based on structural ensemble and multiple peptide templates.

Hong, S., Chung, T., & Kim, D.

PloS One, 2010, 5(9), e12654.